BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020C11SP1|AL427606
(845 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig781 1331 0.0
>3x_Contig781
Length = 2349
Score = 1331 bits (648), Expect = 0.0
Identities = 775/845 (91%), Gaps = 3/845 (0%)
Strand = Plus / Plus
Query: 1 caggwgttagatttcttcaccgtcagatgtgaaacaaagaaattgaagaaacagcggtcg 60
|||| || ||| ||||||||||||||| ||||||| | ||||||||||||||||||||
Sbjct: 510 caggagtaagagttcttcaccgtcagaagtgaaacgag--aattgaagaaacagcggtcg 567
Query: 61 awagacgtgtcgccaagtggaagckaggaacatgatgtggatacgcagacactcccgcag 120
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 568 aaagacgtgtcgccaagtggaagcgaggaacatgatgtggatacgcagacactcccgcag 627
Query: 121 tctcawacaagggtagttccacgakttcagtcacagcaatcaattcagcaaadttcaagg 180
||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||
Sbjct: 628 tctcaaacaagggtagttccacgagttcagtcacagcagtcaattcagcaaagttcaagg 687
Query: 181 caatctatggtrcaagckcagtcatctcgacagctgcagcaacaacaactgcaaaakcag 240
||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 688 caatctatggtgcaagcgcagtcatctcgacagctgcagcagcaacaactgcaaaagcag 747
Query: 241 cgatcrgtrtctcccacacagaagctgccgataacacataatwwttttcctcctgtggta 300
||||| || ||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 748 cgatcggtgtctcccacacagaagctgccgataacacataataatgttcctcctgtggta 807
Query: 301 gttcagrcacatatrgaaccgawatctgtmmaatatccggagacccaatcawakcmaaat 360
|||||| ||||||| ||||||| |||||| |||||||||||||||||||| | | || |
Sbjct: 808 gttcaggcacatatggaaccgaaatctgtccaatatccggagacccaatcaaagccaagt 867
Query: 361 acttctaawaatcdttttttagatkaagaacaacaaaatatattccgawaatyaaataag 420
|||||| || | ||| |||||| | ||||||||| |||| |||||| ||| |||||||
Sbjct: 868 acttctggaaagcgtttgttagatgaggaacaacaagatat-ttccgaaaatcaaataag 926
Query: 421 twawatgcaacggcttgatagtkgaaacctatctaattctaccgctgmacataamgctgc 480
| | | |||||||||||||||| |||||||||||||||||||||||| || ||| |||||
Sbjct: 927 taaaaggcaacggcttgatagtggaaacctatctaattctaccgctgcacgtaacgctgc 986
Query: 481 aacaatggaaattccgcctcatccttattctcatatgatagayatctcacaattgcwtgc 540
||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||
Sbjct: 987 aacaatggaaattccgcctcatccttattctcagatgatagacatctcacaattgcatgc 1046
Query: 541 taacycawcaccaattggkgtgawatatcctcaaccctatattatdgaatctattatmaa 600
| || || |||||||||| |||| | | ||||||||||||||||| ||||||||||| ||
Sbjct: 1047 tgacccaacaccaattggggtgaaagaacctcaaccctatattatagaatctattatcaa 1106
Query: 601 caatgtatcaaarraagagcgtaagacgtttttcgaagatgacataaatgtgaaagaggc 660
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 caatgtatcaaaggaagagcgtaagacgtttttcgaagatgacataaatgtgaaagaggc 1166
Query: 661 ggtatacatgattacgaaagagaacgcgmcaacmaagttggcaaagggtatgcccattca 720
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 1167 ggtatacatgattacgaaagagaacgcgccaaccaagttggcaaagggtatgcccattca 1226
Query: 721 agaaatcaaatacttatcccagactttgcccttgctgagattgataccacaatctcaaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1227 agaaatcaaatacttatcccagactttgcccttgctgagattgataccacaatctcaaaa 1286
Query: 781 agcmttgacgactgatctgattaatactgcattgaatgadagacgaatcactgtagaagc 840
||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 1287 agcattgacgactgatctgattaatactgcattgaatgaaagacgaatcactgtagtagc 1346
Query: 841 atcaa 845
|||||
Sbjct: 1347 atcaa 1351
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.718 1.35
Gapped
Lambda K H
1.42 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4184
Number of Sequences: 1807
Number of extensions: 4184
Number of successful extensions: 121
Number of sequences better than 1.0e-20: 1
length of query: 845
length of database: 10,358,551
effective HSP length: 16
effective length of query: 829
effective length of database: 10,329,639
effective search space: 8563270731
effective search space used: 8563270731
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.8 bits)
S1: 11 (23.1 bits)
S2: 49 (101.1 bits)